Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548f in GLB Brain Sun Cluster 60 Table contains all genes in the GLB Brain Sun cluster number 60. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548f 115123 MARCH3 membrane-associated ring finger (C3HC4) 3 [Source:HGNC Symbol;Acc:28728] P T 54482 CCDC76 coiled-coil domain containing 76 [Source:HGNC Symbol;Acc:25502] zzz999 3707 ITPKB inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:6179] zzz999 25851 TECPR1 tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:22214] zzz999 246330 PELI3 pellino homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:30010] zzz999 350 APOH apolipoprotein H (beta-2-glycoprotein I) [Source:HGNC Symbol;Acc:616] zzz999 23398 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 [Source:HGNC Symbol;Acc:28954] zzz999 2803 GOLGA4 golgin A4 [Source:HGNC Symbol;Acc:4427] T 79684 C11orf61 chromosome 11 open reading frame 61 [Source:HGNC Symbol;Acc:26266] zzz999 49855 SCAPER S-phase cyclin A-associated protein in the ER [Source:HGNC Symbol;Acc:13081] zzz999 4898 NRD1 nardilysin (N-arginine dibasic convertase) [Source:HGNC Symbol;Acc:7995] zzz999 11064 CEP110 centrosomal protein 110kDa [Source:HGNC Symbol;Acc:1858] zzz999 23131 GPATCH8 G patch domain containing 8 [Source:HGNC Symbol;Acc:29066] zzz999 132884 EVC2 Ellis van Creveld syndrome 2 [Source:HGNC Symbol;Acc:19747] zzz999 54455 FBXO42 F-box protein 42 [Source:HGNC Symbol;Acc:29249] zzz999 55707 NECAP2 NECAP endocytosis associated 2 [Source:HGNC Symbol;Acc:25528] zzz999 54790 TET2 tet oncogene family member 2 [Source:HGNC Symbol;Acc:25941] zzz999 5588 PRKCQ protein kinase C, theta [Source:HGNC Symbol;Acc:9410] zzz999 7798 LUZP1 leucine zipper protein 1 [Source:HGNC Symbol;Acc:14985] zzz999 10927 SPIN1 spindlin 1 [Source:HGNC Symbol;Acc:11243] T 6815 STYX serine/threonine/tyrosine interacting protein [Source:HGNC Symbol;Acc:11447] T 55819 RNF130 ring finger protein 130 [Source:HGNC Symbol;Acc:18280] zzz999 4478 MSN moesin [Source:HGNC Symbol;Acc:7373] zzz999 9731 CEP104 centrosomal protein 104kDa [Source:HGNC Symbol;Acc:24866] zzz999 56673 C11orf16 chromosome 11 open reading frame 16 [Source:HGNC Symbol;Acc:1169] zzz999 55749 CCAR1 cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:24236] zzz999 55773 TBC1D23 TBC1 domain family, member 23 [Source:HGNC Symbol;Acc:25622] zzz999 84163 GTF2IRD2 GTF2I repeat domain containing 2 [Source:HGNC Symbol;Acc:30775] T 167153 PAPD4 PAP associated domain containing 4 [Source:HGNC Symbol;Acc:26776] zzz999 57707 KIAA1609 KIAA1609 [Source:HGNC Symbol;Acc:29325] zzz999 79707 NOL9 nucleolar protein 9 [Source:HGNC Symbol;Acc:26265] zzz999 6887 TAL2 T-cell acute lymphocytic leukemia 2 [Source:HGNC Symbol;Acc:11557] zzz999 345 APOC3 apolipoprotein C-III [Source:HGNC Symbol;Acc:610] zzz999 192670 EIF2C4 eukaryotic translation initiation factor 2C, 4 [Source:HGNC Symbol;Acc:18424] zzz999 9140 ATG12 ATG12 autophagy related 12 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:588] zzz999 22936 ELL2 elongation factor, RNA polymerase II, 2 [Source:HGNC Symbol;Acc:17064] P T 6301 SARS seryl-tRNA synthetase [Source:HGNC Symbol;Acc:10537] zzz999 55342 STRBP spermatid perinuclear RNA binding protein [Source:HGNC Symbol;Acc:16462] zzz999 3000 GUCY2D guanylate cyclase 2D, membrane (retina-specific) [Source:HGNC Symbol;Acc:4689] zzz999 54765 TRIM44 tripartite motif containing 44 [Source:HGNC Symbol;Acc:19016] zzz999 6548 SLC9A1 solute carrier family 9 (sodium/hydrogen exchanger), member 1 [Source:HGNC Symbol;Acc:11071] zzz999 114784 CSMD2 CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:19290] zzz999 9263 STK17A serine/threonine kinase 17a [Source:HGNC Symbol;Acc:11395] zzz999 5255 PHKA1 phosphorylase kinase, alpha 1 (muscle) [Source:HGNC Symbol;Acc:8925] T 79862 ZNF669 zinc finger protein 669 [Source:HGNC Symbol;Acc:25736] zzz999 3891 KRT85 keratin 85 [Source:HGNC Symbol;Acc:6462] zzz999 9967 THRAP3 thyroid hormone receptor associated protein 3 [Source:HGNC Symbol;Acc:22964] P 22931 RAB18 RAB18, member RAS oncogene family [Source:HGNC Symbol;Acc:14244] P T 57448 BIRC6 baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:13516] zzz999 79871 RPAP2 RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:25791] T 26574 AATF apoptosis antagonizing transcription factor [Source:HGNC Symbol;Acc:19235] zzz999 64802 NMNAT1 nicotinamide nucleotide adenylyltransferase 1 [Source:HGNC Symbol;Acc:17877] zzz999 8548 BLZF1 basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:1065] zzz999 84267 C9orf64 chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:28144] zzz999 54521 WDR44 WD repeat domain 44 [Source:HGNC Symbol;Acc:30512] zzz999 1964 EIF1AX eukaryotic translation initiation factor 1A, X-linked [Source:HGNC Symbol;Acc:3250] zzz999 203245 NAIF1 nuclear apoptosis inducing factor 1 [Source:HGNC Symbol;Acc:25446] zzz999 257629 ANKS4B ankyrin repeat and sterile alpha motif domain containing 4B [Source:HGNC Symbol;Acc:26795] zzz999 343099 CCDC18 coiled-coil domain containing 18 [Source:HGNC Symbol;Acc:30370] zzz999 1608 DGKG diacylglycerol kinase, gamma 90kDa [Source:HGNC Symbol;Acc:2853] zzz999 160418 TMTC3 transmembrane and tetratricopeptide repeat containing 3 [Source:HGNC Symbol;Acc:26899] zzz999 29097 CNIH4 cornichon homolog 4 (Drosophila) [Source:HGNC Symbol;Acc:25013] zzz999 7385 UQCRC2 ubiquinol-cytochrome c reductase core protein II [Source:HGNC Symbol;Acc:12586] zzz999 157769 FAM91A1 family with sequence similarity 91, member A1 [Source:HGNC Symbol;Acc:26306] P 84901 NFATC2IP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein [Source:HGNC Symbol;Acc:25906] zzz999 22 ABCB7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:HGNC Symbol;Acc:48] zzz999 57645 POGK pogo transposable element with KRAB domain [Source:HGNC Symbol;Acc:18800] T 83941 TM2D1 TM2 domain containing 1 [Source:HGNC Symbol;Acc:24142] zzz999 64975 MRPL41 mitochondrial ribosomal protein L41 [Source:HGNC Symbol;Acc:14492] zzz999 2623 GATA1 GATA binding protein 1 (globin transcription factor 1) [Source:HGNC Symbol;Acc:4170] zzz999 54881 TEX10 testis expressed 10 [Source:HGNC Symbol;Acc:25988] zzz999 7320 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:HGNC Symbol;Acc:12473] zzz999 5378 PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:9121] zzz999 64710 NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:HGNC Symbol;Acc:29923] zzz999 9863 MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 [Source:HGNC Symbol;Acc:18957] zzz999 148867 SLC30A7 solute carrier family 30 (zinc transporter), member 7 [Source:HGNC Symbol;Acc:19306] T 140890 SREK1 splicing regulatory glutamine/lysine-rich protein 1 [Source:HGNC Symbol;Acc:17882] P 26046 LTN1 listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:13082] zzz999 7403 KDM6A lysine (K)-specific demethylase 6A [Source:HGNC Symbol;Acc:12637] P 5116 PCNT pericentrin [Source:HGNC Symbol;Acc:16068] zzz999 9578 CDC42BPB CDC42 binding protein kinase beta (DMPK-like) [Source:HGNC Symbol;Acc:1738] P 6018 RLF rearranged L-myc fusion [Source:HGNC Symbol;Acc:10025] zzz999 4899 NRF1 nuclear respiratory factor 1 [Source:HGNC Symbol;Acc:7996] zzz999 9627 SNCAIP synuclein, alpha interacting protein [Source:HGNC Symbol;Acc:11139] zzz999 123811 FOPNL FGFR1OP N-terminal like [Source:HGNC Symbol;Acc:26435] zzz999 6713 SQLE squalene epoxidase [Source:HGNC Symbol;Acc:11279] zzz999 27125 AFF4 AF4/FMR2 family, member 4 [Source:HGNC Symbol;Acc:17869] zzz999 54205 CYCS cytochrome c, somatic [Source:HGNC Symbol;Acc:19986] zzz999

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